Phenotype list for the CAGI 2011 PGP challenge

Binary traits
1 Asthma *
2 Crohn's disease
3 Ulcerative colitis
4 Irritable bowel syndrome
5 Rheumatoid arthritis
6 Type II Diabetes
7 Coronary artery disease
8 Long QT Syndrome
9 Hypertrophic cardiomyopathy
10 Glaucoma *
11 Color blindness
12 Bipolar disorder
13 Celiac disease
14 Psoriasis
15 Lupus
16 Breast cancer
17 Prostate cancer
18 Migraine *
19 Lactose intolerance
20 Dyslexia
21 Autism
22 Osteoporosis
23 Incontinence
24 Kidney stones
25 Varicose veins
26 Sleep Apnea
27 Tongue rolling (tube)
28 Phenylthiocarbamide tasting
29 Blood type - Has A antigen?
30 Blood type - Has B antigen?
31 Blood type - Is Rh(D) positive?
32 Absolute pitch

Numerical traits
33 Birth weight (in g)
34 HDL level (in mg/dL) *
35 LDL level (in mg/dL) *
36 Triglyceride level (in mg/dL) *
37 Fasting blood glucose level (in mg/dL)
38 Warfarin dose (in mg)
39 Age at Menarche
40 Annual income (in $)

*For some of the PGP10 individuals, these phenotypes are listed in their public profiles at http://www.personalgenomes.org/public/, or http://evidence.personalgenomes.org/genomes (click the "Get report" link of each of the individuals). When publicly available, such phenotypes will not be assessed for the individual in question, but predictions for other PGP10 individuals will be assessed.